 |
Job Description | TBN1_____ | Confidence | 3.56% | Date | Tue Oct 5 13:03:03 BST 2021 |
Rank | 100 | Aligned Residues | 34 |
% Identity | 15% | Template | c6tbmP_ |
PDB info |
PDB header:transcription | Chain: P: PDB Molecule:transcription and mrna export factor sus1; |
PDBTitle: structure of saga bound to tbp, including spt8 and dub
PDB Entry: PDBe RCSB PDBj
|
Resolution | 20.00 Å |
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | R | I | A | Q | G | L | L | N | D | E | A | A | H | A | V | K | M | L | L | P | E | Y | V | N | G | D | L | S | A | L | C | V | W | P | D | Q | V | R |
Query Conservation |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|
|
|
|
|
|   |
|
|
|   |   |   |
| . | . | . | . | . |   |   |
|
|   |
|
|
|
|   |
|
|
|
|
Template Sequence |   |
Q | Q | I | Q | D | V | L | V | E | S | G | K | Y | D | E | L | S | N | F | L | . |
. |
. |
. |
. |
R | S | K | L | Y | Q | V | G | W | T | D | E | I | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is now FREE for commercial users!
All images and data generated by Phyre2 are free to use in any
publication with acknowledgement
Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis |
Kelley LA et al. Nature Protocols
10, 845-858 (2015)
[paper]
[Citation
link] |
  |
|
 |
|