Phyre Home Retrieve Phyre Job Id
Emailspiwokv@vscht.cz
DescriptionTBN1_____
DateTue Oct 5 13:03:03 BST 2021
Unique Job ID4e20dd75aaf64016
SequenceWSKEGHVMTC ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:53.426 Y:43.634 Z:54.330
Model (left) based on template c3sngA_
Top template information
PDB header:hydrolase
Chain: A: PDB Molecule:nuclease;
PDBTitle: x-ray structure of fully glycosylated bifunctional nuclease tbn1 from2 solanum lycopersicum (tomato)
PDB Entry: PDBe RCSB PDBj
Confidence and coverage
Confidence:100.0% Coverage: 96%
267 residues ( 96% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3sngA_



100.0 100
PDB header:hydrolase
Chain: A: PDB Molecule:nuclease;
PDBTitle: x-ray structure of fully glycosylated bifunctional nuclease tbn1 from2 solanum lycopersicum (tomato)
PDB Entry: PDBe RCSB PDBj
2c3w52A_



100.0 54
PDB header:hydrolase
Chain: A: PDB Molecule:endonuclease 2;
PDBTitle: zinc-dependent bifunctional nuclease
PDB Entry: PDBe RCSB PDBj
3d1ak0a_



100.0 29
Fold: Phospholipase C/P1 nuclease
Superfamily: Phospholipase C/P1 nuclease
Family: P1 nuclease
PDB entry: PDBe RCSB PDBj
4c5fbfA_



100.0 29
PDB header:hydrolase
Chain: A: PDB Molecule:nuclease s1;
PDBTitle: s1 nuclease from aspergillus oryzae in complex with two molecules of2 2'-deoxycytidine-5'-monophosphate
PDB Entry: PDBe RCSB PDBj
5d1ah7a_



100.0 15
Fold: Phospholipase C/P1 nuclease
Superfamily: Phospholipase C/P1 nuclease
Family: Phospholipase C
PDB entry: PDBe RCSB PDBj
6d1khoa1



98.6 17
Fold: Phospholipase C/P1 nuclease
Superfamily: Phospholipase C/P1 nuclease
Family: Phospholipase C
PDB entry: PDBe RCSB PDBj
7d1olpa1



98.4 17
Fold: Phospholipase C/P1 nuclease
Superfamily: Phospholipase C/P1 nuclease
Family: Phospholipase C
PDB entry: PDBe RCSB PDBj
8c1olpB_



97.4 17
PDB header:hydrolase
Chain: B: PDB Molecule:alpha-toxin;
PDBTitle: alpha toxin from clostridium absonum
PDB Entry: PDBe RCSB PDBj
9c1gygA_



97.3 22
PDB header:hydrolase
Chain: A: PDB Molecule:phospholipase c;
PDBTitle: r32 closed form of alpha-toxin from clostridium perfringens strain2 cer89l43
PDB Entry: PDBe RCSB PDBj
10d1ca1a1



96.7 17
Fold: Phospholipase C/P1 nuclease
Superfamily: Phospholipase C/P1 nuclease
Family: Phospholipase C
PDB entry: PDBe RCSB PDBj
11c4xpmA_



27.4 30
PDB header:protein binding
Chain: A: PDB Molecule:protein meh1;
PDBTitle: crystal structure of ego-tc
PDB Entry: PDBe RCSB PDBj
12c3d0wD_



17.5 12
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:yflh protein;
PDBTitle: crystal structure of yflh protein from bacillus subtilis. northeast2 structural genomics consortium target sr326
PDB Entry: PDBe RCSB PDBj
13c2gq1A_



14.9 8
PDB header:hydrolase
Chain: A: PDB Molecule:fructose-1,6-bisphosphatase;
PDBTitle: crystal structure of recombinant type i fructose-1,6-bisphosphatase2 from escherichia coli complexed with sulfate ions
PDB Entry: PDBe RCSB PDBj
14c3wajA_



14.7 24
PDB header:transferase
Chain: A: PDB Molecule:transmembrane oligosaccharyl transferase;
PDBTitle: crystal structure of the archaeoglobus fulgidus2 oligosaccharyltransferase (o29867_arcfu) complex with zn and sulfate
PDB Entry: PDBe RCSB PDBj
15c7ns5B_



12.8 11
PDB header:hydrolase
Chain: B: PDB Molecule:fructose-1,6-bisphosphatase;
PDBTitle: structure of yeast fbp1 (fructose-1,6-bisphosphatase 1)
PDB Entry: PDBe RCSB PDBj
16c6qpkA_



10.9 21
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: zt-kp6-1: an effector from zymoseptoria tritici
PDB Entry: PDBe RCSB PDBj
17c2eouA_



10.7 36
PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of the c2h2 type zinc finger (region 370-2 400) of human zinc finger protein 473
PDB Entry: PDBe RCSB PDBj
18c2rhsB_



9.4 21
PDB header:ligase
Chain: B: PDB Molecule:phenylalanyl-trna synthetase beta chain;
PDBTitle: phers from staphylococcus haemolyticus- rational protein engineering2 and inhibitor studies
PDB Entry: PDBe RCSB PDBj
19c5fugI_



9.2 45
PDB header:dna binding protein
Chain: I: PDB Molecule:vacuolar protein sorting-associated protein 72 homolog;
PDBTitle: crystal structure of a human yl1-h2a.z-h2b complex
PDB Entry: PDBe RCSB PDBj
20c3ikoC_



8.9 9
PDB header:structural protein, protein transport
Chain: C: PDB Molecule:nucleoporin nup84;
PDBTitle: crystal structure of the heterotrimeric sec13-nup145c-nup842 nucleoporin complex
PDB Entry: PDBe RCSB PDBj
21c6npcB_



not modelled 8.6 31
PDB header:oxidoreductase
Chain: B: PDB Molecule:tmpa, 2-trimethylaminoethylphosphonate hydroxylase;
PDBTitle: x-ray crystal structure of tmpa, 2-trimethylaminoethylphosphonate2 hydroxylase, with fe, 2og, and 2-trimethylaminoethylphosphonate
PDB Entry: PDBe RCSB PDBj
22c6nyqC_



not modelled 8.5 35
PDB header:immune system
Chain: C: PDB Molecule:glycosylated lysosomal membrane protein;
PDBTitle: crystal structure of glycosylated lysosomal membrane protein (glmp)2 luminal domain bound to a fab fragment
PDB Entry: PDBe RCSB PDBj
23c6tv0G_



not modelled 7.8 22
PDB header:hydrolase
Chain: G: PDB Molecule:cyanate hydratase;
PDBTitle: serratia spp. cyanase hydratase
PDB Entry: PDBe RCSB PDBj
24c1fpvA_



not modelled 7.7 15
PDB header:virus
Chain: A: PDB Molecule:feline panleukopenia virus (strain b) viral
PDBTitle: structure determination of feline panleukopenia virus empty2 particles
PDB Entry: PDBe RCSB PDBj
25c3zbqA_



not modelled 7.3 26
PDB header:viral protein
Chain: A: PDB Molecule:phikz039;
PDBTitle: protofilament of tubz from bacteriophage phikz
PDB Entry: PDBe RCSB PDBj
26c2g8gA_



not modelled 7.2 20
PDB header:virus
Chain: A: PDB Molecule:capsid;
PDBTitle: structurally mapping the diverse phenotype of adeno-2 associated virus serotype 4
PDB Entry: PDBe RCSB PDBj
27c3h3gB_



not modelled 7.0 50
PDB header:membrane protein
Chain: B: PDB Molecule:parathyroid hormone-related protein;
PDBTitle: crystal structure of the extracellular domain of the human parathyroid2 hormone receptor (pth1r) in complex with parathyroid hormone-related3 protein (pthrp)
PDB Entry: PDBe RCSB PDBj
28d2ebfx2



not modelled 6.8 30
Fold: EreA/ChaN-like
Superfamily: EreA/ChaN-like
Family: PMT domain-like
PDB entry: PDBe RCSB PDBj
29c5chlA_



not modelled 6.6 45
PDB header:chaperone
Chain: A: PDB Molecule:vacuolar protein sorting-associated protein 72 homolog;
PDBTitle: structural basis of h2a.z recognition by yl1 histone chaperone2 component of srcap/swr1 chromatin remodeling complex
PDB Entry: PDBe RCSB PDBj
30d1spia_



not modelled 6.6 17
Fold: Carbohydrate phosphatase
Superfamily: Carbohydrate phosphatase
Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like
PDB entry: PDBe RCSB PDBj
31c6mzlS_



not modelled 6.5 25
PDB header:transcription
Chain: S: PDB Molecule:transcription initiation factor tfiid subunit 13;
PDBTitle: human tfiid canonical state
PDB Entry: PDBe RCSB PDBj
32d1bh9a_



not modelled 6.5 25
Fold: Histone-fold
Superfamily: Histone-fold
Family: TBP-associated factors, TAFs
PDB entry: PDBe RCSB PDBj
33c2iv1J_



not modelled 6.5 24
PDB header:lyase
Chain: J: PDB Molecule:cyanate hydratase;
PDBTitle: site directed mutagenesis of key residues involved in the catalytic2 mechanism of cyanase
PDB Entry: PDBe RCSB PDBj
34d2b0la1



not modelled 6.4 13
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: "Winged helix" DNA-binding domain
Family: CodY HTH domain
PDB entry: PDBe RCSB PDBj
35c1zgxA_



not modelled 6.3 12
PDB header:hydrolase
Chain: A: PDB Molecule:guanyl-specific ribonuclease sa;
PDBTitle: crystal structure of ribonuclease mutant
PDB Entry: PDBe RCSB PDBj
36d1bk4a_



not modelled 6.2 14
Fold: Carbohydrate phosphatase
Superfamily: Carbohydrate phosphatase
Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like
PDB entry: PDBe RCSB PDBj
37d2qzga1



not modelled 6.1 18
Fold: Bromodomain-like
Superfamily: Ta0600-like
Family: Ta0600-like
PDB entry: PDBe RCSB PDBj
38c3waiA_



not modelled 5.8 33
PDB header:transferase, transport protein
Chain: A: PDB Molecule:maltose-binding periplasmic protein, transmembrane
PDBTitle: crystal structure of the c-terminal globular domain of2 oligosaccharyltransferase (afaglb-l, o29867_arcfu) from archaeoglobus3 fulgidus as a mbp fusion
PDB Entry: PDBe RCSB PDBj
39d1jjcb6



not modelled 5.8 35
Fold: PheT/TilS domain
Superfamily: PheT/TilS domain
Family: B3/B4 domain of PheRS, PheT
PDB entry: PDBe RCSB PDBj
40c5oezA_



not modelled 5.7 21
PDB header:hydrolase
Chain: A: PDB Molecule:fbp protein;
PDBTitle: crystal structure of leishmania major fructose-1,6-bisphosphatase in2 apo form.
PDB Entry: PDBe RCSB PDBj
41c6uabB_



not modelled 5.5 40
PDB header:peptide binding protein/inhibitor
Chain: B: PDB Molecule:modified unnatural bim bh3 peptide;
PDBTitle: human mcl-1 in complex with a modified unnatural bim bh3 peptide
PDB Entry: PDBe RCSB PDBj
42d1d9qa_



not modelled 5.5 11
Fold: Carbohydrate phosphatase
Superfamily: Carbohydrate phosphatase
Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like
PDB entry: PDBe RCSB PDBj
43d1c8da_



not modelled 5.5 15
Fold: Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily: ssDNA viruses
Family: Parvoviridae-like VP
PDB entry: PDBe RCSB PDBj
44c5a4jC_



not modelled 5.3 63
PDB header:ligase
Chain: C: PDB Molecule:formate--tetrahydrofolate ligase;
PDBTitle: crystal structure of fthfs1 from t.acetoxydans re1
PDB Entry: PDBe RCSB PDBj
45d1mvma_



not modelled 5.3 10
Fold: Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily: ssDNA viruses
Family: Parvoviridae-like VP
PDB entry: PDBe RCSB PDBj
46c4g0rA_



not modelled 5.3 15
PDB header:virus/dna
Chain: A: PDB Molecule:capsid protein vp1;
PDBTitle: structural characterization of h-1 parvovirus: comparison of2 infectious virions to replication defective particles
PDB Entry: PDBe RCSB PDBj
47c2fhyL_



not modelled 5.3 11
PDB header:hydrolase
Chain: L: PDB Molecule:fructose-1,6-bisphosphatase 1;
PDBTitle: structure of human liver fpbase complexed with a novel benzoxazole as2 allosteric inhibitor
PDB Entry: PDBe RCSB PDBj
48d1ftaa_



not modelled 5.2 11
Fold: Carbohydrate phosphatase
Superfamily: Carbohydrate phosphatase
Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like
PDB entry: PDBe RCSB PDBj

Binding site prediction 

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