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Job DescriptionTBN1_____
Confidence100.00%DateTue Oct 5 13:03:03 BST 2021
Rank1Aligned Residues267
% Identity100%Templatec3sngA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:nuclease; PDBTitle: x-ray structure of fully glycosylated bifunctional nuclease tbn1 from2 solanum lycopersicum (tomato)
PDB Entry: PDBe RCSB PDBj
Resolution2.16 Å
Model Dimensions (Å)X:58.071 Y:50.068 Z:42.055

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60
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Query Sequence  WSKEGHVMTCRIAQGLLNDEAAHAVKMLLPEYVNGDLSALCVWPDQVRHWYKYKWTSPLH
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Template Sequence  WSKEGHVMTCRIAQGLLNDEAAHAVKMLLPEYVNGDLSALCVWPDQVRHWYKYKWTSPLH
Template Known Secondary structure 

TT

S
GGGTT
GGGTTTTTSGGGGGGGGGG
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   26...30.........40.........50.........60.........70.........80.....
 
   61........70.........80.........90.........100.........110.........120
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Query Sequence  FIDTPDKACNFDYERDCHDQHGVKDMCVAGAIQNFTTQLSHYREGTSDRRYNMTEALLFL
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Template Sequence  FIDTPDKACNFDYERDCHDQHGVKDMCVAGAIQNFTTQLSHYREGTSDRRYNMTEALLFL
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B
TTT




B
TT

BT
STTTTT



TT

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   86...90.........100.........110.........120.........130.........140.....
 
   121........130.........140.........150.........160.........170.........180
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Query Sequence  SHFMGDIHQPMHVGFTSDAGGNSIDLRWFRHKSNLHHVWDREIILTAAKDYYAKDINLLE
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Template Sequence  SHFMGDIHQPMHVGFTSDAGGNSIDLRWFRHKSNLHHVWDREIILTAAKDYYAKDINLLE
Template Known Secondary structure  SGGGG
BTTTTTTTT
TTTTT
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   146...150.........160.........170.........180.........190.........200.....
 
   181........190.........200.........210.........220.........230.........240
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Query Sequence  EDIEGNFTDGIWSDDLASWRECGNVFSCVNKFATESINIACKWGYKGVEAGETLSDDYFN
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Template Sequence  EDIEGNFTDGIWSDDLASWRECGNVFSCVNKFATESINIACKWGYKGVEAGETLSDDYFN
Template Known Secondary structure  TSTTTTT


STTSTT

TT

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   206...210.........220.........230.........240.........250.........260.....
 
   241........250.........260.......
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Query Sequence  SRLPIVMKRVAQGGIRLAMLLNNVFGA
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Template Sequence  SRLPIVMKRVAQGGIRLAMLLNNVFGA
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   266...270.........280.........290..
 
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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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