 |
Job Description | TBN1_____ | Confidence | 4.06% | Date | Tue Oct 5 13:03:03 BST 2021 |
Rank | 77 | Aligned Residues | 27 |
% Identity | 30% | Template | c1ujlA_ |
PDB info |
PDB header:membrane protein | Chain: A: PDB Molecule:potassium voltage-gated channel subfamily h |
PDBTitle: solution structure of the herg k+ channel s5-p2 extracellular linker
PDB Entry: PDBe RCSB PDBj
|
Resolution | UNK |
|
  |   |
119 | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | L | S | H | F | M | G | D | I | H | Q | P | M | H | V | G | F | T | S | D | A | G | G | N | S | I | D | L | R | W |
Query Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |
|
|
|   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |   |   |   |
|   |
|   | . | . | . |   |   |   |   |   |
|
|
|
|
|   |
|
|
Template Sequence |   |
W | L | H | N | L | G | D | Q | I | G | K | P | Y | N | . |
. |
. |
S | S | G | L | G | G | P | S | I | K | D | K | Y |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  |
|
| S | S |
| . | . | . |
|
|
|
| S |
|  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
|
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is now FREE for commercial users!
All images and data generated by Phyre2 are free to use in any
publication with acknowledgement
Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis |
Kelley LA et al. Nature Protocols
10, 845-858 (2015)
[paper]
[Citation
link] |
  |
|
 |
|