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Job DescriptionTBN1_____
Confidence97.41%DateTue Oct 5 13:03:03 BST 2021
Rank8Aligned Residues221
% Identity17%Templatec1olpB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:alpha-toxin; PDBTitle: alpha toxin from clostridium absonum
PDB Entry: PDBe RCSB PDBj
Resolution2.5 Å
Model Dimensions (Å)X:54.786 Y:51.874 Z:42.795

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SKEGHVMTCRIAQGLLNDE. . . . . . . AAHAVKMLLPEYVNGDLSALCVWPDQVRHWYKYK
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Template Sequence  GTGTHSVIVTQAIEMLKHDLSKDEPEAIRNDLSILE. KNLHKFQLGSTFPDYDPNAYS. .
Template Known Secondary structure  TBS

TTS
.TGGGG
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   7..10.........20.........30.........40.. .......50.........60...
 
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Query Sequence  WTSPLHFIDTPDKACNFDYERDCHDQHGVKDMCVAGAIQNFTTQLSHYREGTSDRRYNMT
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Template Sequence  . LYQDHFWDP. DTDHNFTQDNKWYLSYAVPDNAESQTRKFATLAKNEWDKGNYEKA. . . A
Template Known Secondary structure  .T
GGG

BT.TTTB

GGGGGG

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   64.....70.. .......80.........90.........100.........110....... .
 
   115....120.........130.........140.........150.........160.... .....170...
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Query Sequence  EALLFLSHFMGDIHQPMHVGFTSDAGGNSIDLRWFRHKSNLHHVWDREII. LTAAKDYYA
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Template Sequence  WYLGQGMHYFGDLNTPYHAA. . . . . . . . . . . . NVTAVDSPGHVKFETYAEERKDTYRLDT
Template Known Secondary structure  TST............T

TTT
TGGGG

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   119120.........130........ .140.........150.........160......
 
   174.....180.........190.........200.........210.........220.........230...
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Query Sequence  KDINLLEEDIEGNFTDGIWSDDLASWRECGNVFSCVNKFATESINIACKWGYKGVEAGET
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Template Sequence  TGYNTDDAFYKDTLKNDNFNEW. . . . . . . . . . . . . SKGYCKYWAKKAKNLYYSHATMSNS
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   167..170.........180........ .190.........200.........210...
 
   234.....240.........250.....
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Query Sequence  LSDDYFNSRLPIVMKRVAQGGI
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Template Sequence  WDDWEYAASHGVGNAQKGVAGY
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   214.....220.........230.....
 
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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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