PTreeGenerator  1.0
Simple phylogenetic tree generation from multiple sequence alignment.
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tree_utils.py File Reference

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Packages

namespace  ptreegen.utilities.tree_utils
namespace  tree_utils
 Defines a number of functions that can be used to manipulate a tree.

Functions

def ptreegen.utilities.tree_utils.findShortestEdge
 Finds the two vertices with minimal edge weight.
def ptreegen.utilities.tree_utils.initEdgeLengths
 Initializes all edges in the tree to a given value.
def ptreegen.utilities.tree_utils.findConsensusTree
 Returns weighted consensus tree.