PTreeGenerator  1.0
Simple phylogenetic tree generation from multiple sequence alignment.
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distance_functions.py File Reference

Go to the source code of this file.

Packages

namespace  ptreegen.distance_functions
namespace  distance_functions
 Contains implementations of possible distance measures.

Functions

def ptreegen.distance_functions.p_distance
 Computation of the uncorrected p-distance.
def ptreegen.distance_functions.poisson_corrected
 Poisson corrected p-distance.
def ptreegen.distance_functions.jukes_cantor
 Distance according to the Jukes-Cantor model.